Publications

Found 226 results

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2014
Camargo Coelho, J., F. V. (2014) Pointing Task Evaluation of Gestural Interface Interaction in 3D Virtual Environment. Ceating the difference: Proceedings of the Chi Sparks 2014 Conference, The Hague, the Netherlands, The Hague University of Applied Sciences , The Netherlands and Chi Nederland , the Dutch association promoting Human - Computer Interaction in The Netherlands (www.chi - nederland.nl).
Carvalho, R.V., Kleijn J., Verbeek F. (2014) A multi-scale extensive Petri Net model of the bacterial-macrophage interaction. Proceedings of the 5th International Workshop on Biological Processes & Petri Nets. CEUR Workshop Proceedings, Tunis, Tunesia.
Slob, J., Verbeek F.J. (2014) Imaging Ontology, contributing to ‘reasonable’ semantics for biomedical repositories. the 6th International Symposium on Semantic Mining in Biomedicine (SMBM 2014), Aveiro, University of Aveiro.
2015
Hermans, K.C.M., Blankesteijn M.W. (2015) Comprehensive PhysiologyWnt Signaling in Cardiac Disease , Hoboken, NJ, USA, John Wiley & Sons, Inc. p. 1183 - 1209.
Bertens, L.M.F., Kleijn J., Hille S.C., Heiner M., Koutny M., Verbeek F.J. (2015) Modeling biological gradient formation: combining partial differential equations and Petri nets Natural Computing.
Labbé, C.M., Kuenemann M.A., Zarzycka B., Vriend G., Nicolaes G.A.F., Lagorce D., Miteva M.A., Villoutreix B.O., Sperandio O. (2015) iPPI-DB: an online database of modulators of protein–protein interactions Nucleic Acids Research 44 (D1) p. D542 - D547.
Zarzycka, B., Seijkens T., Nabuurs S.B., Ritschel T., Grommes J., Soehnlein O., Schrijver R., van Tiel C.M., Hackeng T.M., Weber C., Giehler F., Kieser A., Lutgens E., Vriend G., et al. (2015) Discovery of Small Molecule CD40–TRAF6 Inhibitors Journal of Chemical Information and Modeling 55 (2) p. 294 - 307.
van Verschuer, V.M.T., Hooning M.J., van Baare-Georgieva R.D., Hollestelle A., Timmermans A.M., Koppert L.B., Verhoog L.C., Martens J.W.M., Seynaeve C., van Deurzen C.H.M. (2015) Tumor-associated inflammation as a potential prognostic tool in BRCA1/2-associated breast cancer Human Pathology 46 (2) p. 182 - 190. Abstract
van der Sluis, T.C., van Duikeren S., Huppelschoten S., Jordanova E.S., Beyranvand Nejad E., Sloots A., Boon L., Smit V.T.H.B.M., Welters M.J.P., Ossendorp F., van de Water B., Arens R., van der Burg S.H., Melief C.J.M. (2015) Vaccine-Induced Tumor Necrosis Factor-Producing T Cells Synergize with Cisplatin to Promote Tumor Cell Death Clinical Cancer Research 21 (4) p. 781 - 794. Abstract
Torraca, V., Cui C., Boland R., Bebelman J.-P., van der Sar A.M., Smit M.J., Siderius M., Spaink H.P., Meijer A.H. (2015) The CXCR3-CXCL11 signaling axis mediates macrophage recruitment and dissemination of mycobacterial infection Disease Models & Mechanisms 8 (3) p. 253 - 269.
von Stechow, L., Typas D., Carreras Puigvert J., Oort L., Siddappa R., Pines A., Vrieling H., van de Water B., Mullenders L.H.F., Danen E.H.J. (2015) The E3 Ubiquitin Ligase ARIH1 Protects against Genotoxic Stress by Initiating a 4EHP-Mediated mRNA Translation Arrest Molecular and Cellular Biology 35 (7) p. 1254 - 1268.
Balcioglu, H.E., van Hoorn H., Donato D.M., Schmidt T., Danen E.H.J. (2015) The integrin expression profile modulates orientation and dynamics of force transmission at cell-matrix adhesions Journal of Cell Science 128 (7) p. 1316 - 1326.
Pezzarossa, A., Zosel F., Schmidt T. (2015) Visualization of HRas Domains in the Plasma Membrane of Fibroblasts Biophysical Journal 108 (8) p. 1870 - 1877.
Zarzycka, B., Nicolaes G.A.F., Lutgens E. (2015) Targeting the adaptive immune system: new strategies in the treatment of atherosclerosis Expert Review of Clinical Pharmacology 8 (3) p. 297 - 313.
LeBert, D.C., Squirrell J.M., Rindy J., Broadbridge E., Lui Y., Zakrzewska A., Eliceiri K.W., Meijer A.H., Huttenlocher A. (2015) Matrix metalloproteinase 9 modulates collagen matrices and wound repair Development 142 (12) p. 2136 - 2146.
Suter-Dick, L., Alves P.M., Blaauboer B.J., Bremm K.-D., Brito C., Coecke S., Flick B., Fowler P., Hescheler J., Ingelman-Sundberg M., Jennings P., Kelm J.M., Manou I., Mistry P., et al. (2015) Stem Cell-Derived Systems in Toxicology Assessment Stem Cells and Development 24 (11) p. 1284 - 1296.
Baranski, Z., Booij T.H., Cleton-Jansen A.-M., Price L.S., van de Water B., Bovée J.V.M.G., Hogendoorn P.C.W., Danen E.H.J. (2015) Aven-mediated checkpoint kinase control regulates proliferation and resistance to chemotherapy in conventional osteosarcoma The Journal of Pathology 236 (3) p. 348 - 359.
Martin-Lorenzo, M., Balluff B., Maroto A.S., Carreira R.J., van Zeijl R.J.M., Gonzalez-Calero L., de la Cuesta F., Barderas M.G., Lopez-Almodovar L.F., Padial L.R., McDonnell L.A., Vivanco F., Alvarez-Llamas G. (2015) Molecular anatomy of ascending aorta in atherosclerosis by MS Imaging: Specific lipid and protein patterns reflect pathology Journal of Proteomics 126 p. 245 - 251.
Martin-Lorenzo, M., Balluff B., Maroto A.S., Carreira R.J., van Zeijl R.J.M., Gonzalez-Calero L., de la Cuesta F., Barderas M.G., Lopez-Almodovar L.F., Padial L.R., McDonnell L.A., Vivanco F., Alvarez-Llamas G. (2015) Lipid and protein maps defining arterial layers in atherosclerotic aorta Data in Brief 4 p. 328 - 331.
Harkes, R., Keizer V.I.P., Schaaf M.J.M., Schmidt T. (2015) Depth-of-Focus Correction in Single-Molecule Data Allows Analysis of 3D Diffusion of the Glucocorticoid Receptor in the Nucleus PLOS ONE 10 (11) p. e0141080.
Jansen, K.A., Donato D.M., Balcioglu H.E., Schmidt T., Danen E.H.J., Koenderink G.H. (2015) A guide to mechanobiology: Where biology and physics meet Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1853 (11) p. 3043 - 3052.
Peeters, M.C., Fokkelman M., Boogaard B., Egerod K.L., van de Water B., IJzerman A.P., Schwartz T.W. (2015) The adhesion G protein-coupled receptor G2 (ADGRG2/GPR64) constitutively activates SRE and NFκB and is involved in cell adhesion and migration Cellular Signalling 27 (12) p. 2579 - 2588.
ter Braak, B., Wink S., Koedoot E., Pont C., Siezen C., van der Laan J.W., van de Water B. (2015) Alternative signaling network activation through different insulin receptor family members caused by pro-mitogenic antidiabetic insulin analogues in human mammary epithelial cells Breast Cancer Research 17 (1).
Yang, S., Marín-Juez R., Meijer A.H., Spaink H.P. (2015) Common and specific downstream signaling targets controlled by Tlr2 and Tlr5 innate immune signaling in zebrafish BMC Genomics 16 (12-3416611711794210539668327112369176111-21142443136118111-399241610101313166).