Publications

Found 226 results

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2015
Diebolder, C. A., Halff E. F., Koster A. J., Huizinga E. G., Koning R. I. (2015) Cryoelectron Tomography of the NAIP5/NLRC4 Inflammasome: Implications for NLR Activation Structure 23 (12) p. 2349 - 2357. Abstract
Heijs, B., Abdelmoula W.M., Lou S., Briaire-de Bruijn I.H., Dijkstra J., Bovée J.V.M.G., McDonnell L.A. (2015) Histology-Guided High-Resolution Matrix-Assisted Laser Desorption Ionization Mass Spectrometry Imaging Analytical Chemistry 87 (24) p. 11978 - 11983.
Bronsveld, H.K., ter Braak B., Karlstad Ø., Vestergaard P., Starup-Linde J., Bazelier M.T., De Bruin M.L., de Boer A., Siezen C.L.E., van de Water B., van der Laan J.W., Schmidt M.K. (2015) Treatment with insulin (analogues) and breast cancer risk in diabetics; a systematic review and meta-analysis of in vitro, animal and human evidence Breast Cancer Research 17 (1).
van Beuningen, S. F.B., Will L., Harterink M., Chazeau A., van Battum E. Y., Frias C. P., Franker M. A.M., Katrukha E. A., Stucchi R., Vocking K., Antunes A. T., Slenders L., Doulkeridou S., Sillevis Smitt P., et al. (2015) TRIM46 Controls Neuronal Polarity and Axon Specification by Driving the Formation of Parallel Microtubule Arrays Neuron 88 (6) p. 1208 - 1226. Abstract
Harkes, R., Keizer V.I.P., Schaaf M.J.M., Schmidt T. (2015) Depth-of-Focus Correction in Single-Molecule Data Allows Analysis of 3D Diffusion of the Glucocorticoid Receptor in the Nucleus PLOS ONE 10 (11) p. e0141080.
Jansen, K.A., Donato D.M., Balcioglu H.E., Schmidt T., Danen E.H.J., Koenderink G.H. (2015) A guide to mechanobiology: Where biology and physics meet Biochimica et Biophysica Acta (BBA) - Molecular Cell Research 1853 (11) p. 3043 - 3052.
Martin-Lorenzo, M., Balluff B., Maroto A.S., Carreira R.J., van Zeijl R.J.M., Gonzalez-Calero L., de la Cuesta F., Barderas M.G., Lopez-Almodovar L.F., Padial L.R., McDonnell L.A., Vivanco F., Alvarez-Llamas G. (2015) Lipid and protein maps defining arterial layers in atherosclerotic aorta Data in Brief 4 p. 328 - 331.
Martin-Lorenzo, M., Balluff B., Maroto A.S., Carreira R.J., van Zeijl R.J.M., Gonzalez-Calero L., de la Cuesta F., Barderas M.G., Lopez-Almodovar L.F., Padial L.R., McDonnell L.A., Vivanco F., Alvarez-Llamas G. (2015) Molecular anatomy of ascending aorta in atherosclerosis by MS Imaging: Specific lipid and protein patterns reflect pathology Journal of Proteomics 126 p. 245 - 251.
Baranski, Z., Booij T.H., Cleton-Jansen A.-M., Price L.S., van de Water B., Bovée J.V.M.G., Hogendoorn P.C.W., Danen E.H.J. (2015) Aven-mediated checkpoint kinase control regulates proliferation and resistance to chemotherapy in conventional osteosarcoma The Journal of Pathology 236 (3) p. 348 - 359.
LeBert, D.C., Squirrell J.M., Rindy J., Broadbridge E., Lui Y., Zakrzewska A., Eliceiri K.W., Meijer A.H., Huttenlocher A. (2015) Matrix metalloproteinase 9 modulates collagen matrices and wound repair Development 142 (12) p. 2136 - 2146.
Suter-Dick, L., Alves P.M., Blaauboer B.J., Bremm K.-D., Brito C., Coecke S., Flick B., Fowler P., Hescheler J., Ingelman-Sundberg M., Jennings P., Kelm J.M., Manou I., Mistry P., et al. (2015) Stem Cell-Derived Systems in Toxicology Assessment Stem Cells and Development 24 (11) p. 1284 - 1296.
Zarzycka, B., Nicolaes G.A.F., Lutgens E. (2015) Targeting the adaptive immune system: new strategies in the treatment of atherosclerosis Expert Review of Clinical Pharmacology 8 (3) p. 297 - 313.
von Stechow, L., Typas D., Carreras Puigvert J., Oort L., Siddappa R., Pines A., Vrieling H., van de Water B., Mullenders L.H.F., Danen E.H.J. (2015) The E3 Ubiquitin Ligase ARIH1 Protects against Genotoxic Stress by Initiating a 4EHP-Mediated mRNA Translation Arrest Molecular and Cellular Biology 35 (7) p. 1254 - 1268.
Balcioglu, H.E., van Hoorn H., Donato D.M., Schmidt T., Danen E.H.J. (2015) The integrin expression profile modulates orientation and dynamics of force transmission at cell-matrix adhesions Journal of Cell Science 128 (7) p. 1316 - 1326.
Pezzarossa, A., Zosel F., Schmidt T. (2015) Visualization of HRas Domains in the Plasma Membrane of Fibroblasts Biophysical Journal 108 (8) p. 1870 - 1877.
Torraca, V., Cui C., Boland R., Bebelman J.-P., van der Sar A.M., Smit M.J., Siderius M., Spaink H.P., Meijer A.H. (2015) The CXCR3-CXCL11 signaling axis mediates macrophage recruitment and dissemination of mycobacterial infection Disease Models & Mechanisms 8 (3) p. 253 - 269.
Zarzycka, B., Seijkens T., Nabuurs S.B., Ritschel T., Grommes J., Soehnlein O., Schrijver R., van Tiel C.M., Hackeng T.M., Weber C., Giehler F., Kieser A., Lutgens E., Vriend G., et al. (2015) Discovery of Small Molecule CD40–TRAF6 Inhibitors Journal of Chemical Information and Modeling 55 (2) p. 294 - 307.
van Verschuer, V.M.T., Hooning M.J., van Baare-Georgieva R.D., Hollestelle A., Timmermans A.M., Koppert L.B., Verhoog L.C., Martens J.W.M., Seynaeve C., van Deurzen C.H.M. (2015) Tumor-associated inflammation as a potential prognostic tool in BRCA1/2-associated breast cancer Human Pathology 46 (2) p. 182 - 190. Abstract
van der Sluis, T.C., van Duikeren S., Huppelschoten S., Jordanova E.S., Beyranvand Nejad E., Sloots A., Boon L., Smit V.T.H.B.M., Welters M.J.P., Ossendorp F., van de Water B., Arens R., van der Burg S.H., Melief C.J.M. (2015) Vaccine-Induced Tumor Necrosis Factor-Producing T Cells Synergize with Cisplatin to Promote Tumor Cell Death Clinical Cancer Research 21 (4) p. 781 - 794. Abstract
Labbé, C.M., Kuenemann M.A., Zarzycka B., Vriend G., Nicolaes G.A.F., Lagorce D., Miteva M.A., Villoutreix B.O., Sperandio O. (2015) iPPI-DB: an online database of modulators of protein–protein interactions Nucleic Acids Research 44 (D1) p. D542 - D547.
Hermans, K.C.M., Blankesteijn M.W. (2015) Comprehensive PhysiologyWnt Signaling in Cardiac Disease , Hoboken, NJ, USA, John Wiley & Sons, Inc. p. 1183 - 1209.
Bertens, L.M.F., Kleijn J., Hille S.C., Heiner M., Koutny M., Verbeek F.J. (2015) Modeling biological gradient formation: combining partial differential equations and Petri nets Natural Computing.
2014
Slob, J., Verbeek F.J. (2014) Imaging Ontology, contributing to ‘reasonable’ semantics for biomedical repositories. the 6th International Symposium on Semantic Mining in Biomedicine (SMBM 2014), Aveiro, University of Aveiro.
Carvalho, R.V., Kleijn J., Verbeek F. (2014) A multi-scale extensive Petri Net model of the bacterial-macrophage interaction. Proceedings of the 5th International Workshop on Biological Processes & Petri Nets. CEUR Workshop Proceedings, Tunis, Tunesia.