Publications

Found 226 results

Sort by: Author [ Year  (Desc)]
2014
Hosseini, R., Lamers G.E.M., Hodzic Z., Meijer A.H., Schaaf M.J.M., Spaink H.P. (2014) Correlative light and electron microscopy imaging of autophagy in a zebrafish infection model Autophagy 10 (10) p. 1844 - 1857.
Luo, J., Wärmländer S.K.T.S., Gräslund A., Abrahams J.P. (2014) Non-chaperone Proteins Can Inhibit Aggregation and Cytotoxicity of Alzheimer Amyloid β Peptide Journal of Biological Chemistry 289 (40) p. 27766 - 27775.
Di, Z., Klop M.J.D., Rogkoti V.-M., Le Dévédec S.E., van de Water B., Verbeek F.J., Price L.S., Meerman J.H.N. (2014) Ultra High Content Image Analysis and Phenotype Profiling of 3D Cultured Micro-Tissues PLoS ONE 9 (10) p. e109688.
Cao, L. (2014) Nature Inspired Phenotype Analysis with 3D Model Representation Optimization 4th International Conference on Innovations in Bio-Inspired Computing and Applications, IBICA 2013 237 (4), Ostrava, Czech Republic, Springer International Publishing p. 165 - 174.
Kallergi, A., Verbeek F.J. (2014) Playful Interfaces for Scientific Image Data: a Case for Storytelling Emerging Research and Trends in Interactivity and the Human-Computer Interface (4): IGI Global p. 471-489.
Abdelmoula, W.M., Škrášková K., Balluff B., Carreira R.J., Tolner E.A., Lelieveldt B.P.F., van der Maaten L., Morreau H., van den Maagdenberg A.M.J.M., Heeren R.M.A., McDonnell L.A., Dijkstra J. (2014) Automatic Generic Registration of Mass Spectrometry Imaging Data to Histology Using Nonlinear Stochastic Embedding Analytical Chemistry 86 (18) p. 9204 - 9211.
Martin-Lorenzo, M., Balluff B., Sanz-Maroto A., van Zeijl R.J.M., Vivanco F., Alvarez-Llamas G., McDonnell L.A. (2014) 30μm spatial resolution protein MALDI MSI: In-depth comparison of five sample preparation protocols applied to human healthy and atherosclerotic arteries Journal of Proteomics 108 p. 465 - 468.
Yizhak, K., Le Devedec S.E., Rogkoti V.M., Baenke F., de Boer V.C., Frezza C., Schulze A., van de Water B., Ruppin E. (2014) A computational study of the Warburg effect identifies metabolic targets inhibiting cancer migration Molecular Systems Biology 10 (8) p. 744 - 744.
Koning, R.I., Faas F.G., Boonekamp M., de Visser B., Janse J., Wiegant J.C., de Breij A., Willemse J., Nibbering P.H., Tanke H.J., Koster A.J. (2014) MAVIS: An integrated system for live microscopy and vitrification Ultramicroscopy 143 (45): Springer p. 67 - 76.
Liu, N.Q., De Marchi T., Timmermans A.M., Beekhof R., Trapman-Jansen A.M.A.C., Foekens R., Look M.P., VAN DEURZEN C.H.M., Span P.N., Sweep F.C.G.J., Brask J.B., Timmermans-Wielenga V., Debets R., Martens J.W.M., et al. (2014) Ferritin Heavy Chain in Triple Negative Breast Cancer: A Favorable Prognostic Marker that Relates to a Cluster of Differentiation 8 Positive (CD8+) Effector T-cell Response Molecular & Cellular Proteomics 13 (7) p. 1814 - 1827.
van der Vaart, M., Korbee C. J., Lamers G. E.M., Tengeler A. C., Hosseini R., Haks M. C., Ottenhoff T. H.M., Spaink H. P., Meijer A. H. (2014) The DNA Damage-Regulated Autophagy Modulator DRAM1 Links Mycobacterial Recognition via TLR-MYD88 to Autophagic Defense Cell Host & Microbe 15 (6) p. 753 - 767.
Luo, J., Mohammed I., Wärmländer S.K.T.S., Hiruma Y., Gräslund A., Abrahams J.P. (2014) Endogenous Polyamines Reduce the Toxicity of Soluble Aβ Peptide Aggregates Associated with Alzheimer’s Disease Biomacromolecules 15 (6) p. 1985 - 1991.
de Graauw, M., Cao L., Winkel L., van Miltenburg M.H.A.M., le Dévédec S.E., Klop M., Yan K.K., Pont C., Rogkoti V.-M., Tijsma A., Chaudhuri A., Lalai R., Price L., Verbeek F., et al. (2014) Annexin A2 depletion delays EGFR endocytic trafficking via cofilin activation and enhances EGFR signaling and metastasis formation Oncogene 33 (20), Totowa, NJ, Humana Press p. 2610 - 2619.
Abdelmoula, W.M., Carreira R.J., Shyti R., Balluff B., van Zeijl R.J.M., Tolner E.A., Lelieveldt B.F.P., van den Maagdenberg A.M.J.M., McDonnell L.A., Dijkstra J. (2014) Automatic Registration of Mass Spectrometry Imaging Data Sets to the Allen Brain Atlas Analytical Chemistry 86 (8) p. 3947 - 3954.
Wink, S., Hiemstra S., Huppelschoten S., Danen E., Niemeijer M., Hendriks G., Vrieling H., Herpers B., van de Water B. (2014) Quantitative High Content Imaging of Cellular Adaptive Stress Response Pathways in Toxicity for Chemical Safety Assessment Chemical Research in Toxicology 27 (3) p. 338 - 355.
Chatzigeorgiou, A., Seijkens T., Zarzycka B., Engel D., Poggi M., van den Berg S., van den Berg S., Soehnlein O., Winkels H., Beckers L., Lievens D., Driessen A., Kusters P., Biessen E., et al. (2014) Blocking CD40-TRAF6 signaling is a therapeutic target in obesity-associated insulin resistance Proceedings of the National Academy of Sciences 111 (7), Totowa, NJ, Humana Press p. 2686 - 2691.
Liu, N.Q., Stingl C., Look M.P., Smid M., Braakman R.B.H., De Marchi T., Sieuwerts A.M., Span P.N., Sweep F.C.G.J., Linderholm B.K., Mangia A., Paradiso A., Dirix L.Y., Van Laere S.J., et al. (2014) Comparative Proteome Analysis Revealing an 11-Protein Signature for Aggressive Triple-Negative Breast Cancer JNCI Journal of the National Cancer Institute 106 (2) p. djt376 - djt376.
Luo, J., Abrahams J.P. (2014) Cyclic Peptides as Inhibitors of Amyloid Fibrillation Chemistry - A European Journal 20 (9): Springer p. 2410 - 2419.
Truong, H.H., Xiong J., Ghotra V.P.S., Nirmala E., Haazen L., Le Devedec S.E., Balcio lu H.E., He S., Snaar-Jagalska B.E., Vreugdenhil E., Meerman J.H.N., van de Water B., Danen E.H.J. (2014) β1 Integrin Inhibition Elicits a Prometastatic Switch Through the TGFβ-miR-200-ZEB Network in E-Cadherin-Positive Triple-Negative Breast Cancer Science Signaling 7 (312): Springer p. ra15 - ra15.
Ramaiahgari, S.C., den Braver M.W., Herpers B., Terpstra V., Commandeur J.N.M., van de Water B., Price L.S. (2014) A 3D in vitro model of differentiated HepG2 cell spheroids with improved liver-like properties for repeated dose high-throughput toxicity studies Archives of Toxicology.
Abdelmoula, W.M., Carreira R.J., Shyti R., Balluff B., Tolner E., van den Maagdenberg A.M.J.M., Lelieveldt B.P.F. (2014) Automatic registration of imaging mass spectrometry data to the Allen Brain Atlas transcriptome SPIE Medical Imaging 2014: Image Processing 9034, San Diego, California, USA, SPIE p. 90343M.
Koning, R.I., Celler K., Willemse J., Bos E., van Wezel G.P., Koster A.J. (2014) Correlative cryo-fluorescence light microscopy and cryo-electron tomography of Streptomyces. 124: Elsevier p. 217 - 239.
Larios, E., Zhang Y., Cao L., Verbeek F.J. (2014) CytomicsDB: A Metadata-Based Storage and Retrieval Approach for High-Throughput Screening Experiments Pattern Recognition in Bioinformatics 8626, Cham, Springer International Publishing p. 72 - 84.
Stokman, G., Qin Y., Booij T.H., Ramaiahgari S., Lacombe M., Dolman M.E.M., van Dorenmalen K.M.A., Teske G.J.D., Florquin S., Schwede F., van de Water B., Kok R.J., Price L.S. (2014) Epac-Rap Signaling Reduces Oxidative Stress in the Tubular Epithelium Journal of the American Society of Nephrology.
van der Kolk, A.G., Zwanenburg J.J.M., Denswil N.P., Vink A., Spliet W.G.M., Daemen M.J.A.P., Visser F., Klomp D.W.J., Luijten P.R., Hendrikse J. (2014) Imaging the Intracranial Atherosclerotic Vessel Wall Using 7T MRI: Initial Comparison with Histopathology American Journal of Neuroradiology.