Publications

Found 226 results

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2011
Jiang, L., Georgieva D., Abrahams J.P. (2011) EDIFF : a program for automated unit-cell determination and indexing of electron diffraction data Journal of Applied Crystallography 44 (5) p. 1132 - 1136.
Mueller, D., Vossen D., Hulsken B. (2011) Real-time deformable registration of multi-modal whole slides for digital pathology Computerized Medical Imaging and Graphics 35 (7-8) p. 542 - 556.
Wang, J.-W., Valentijn K.M., de Boer H.C., Dirven R.J., van Zonneveld A.J., Koster A.J., Voorberg J., Reitsma P.H., Eikenboom J. (2011) Intracellular Storage and Regulated Secretion of Von Willebrand Factor in Quantitative Von Willebrand Disease Journal of Biological Chemistry 286 (27) p. 24180 - 24188.
Damiano, L., Le Dévédec S.E., Di Stefano P., Repetto D., Lalai R., Truong H.H., Xiong J.J.L., Danen E.H.J., Yan K.K., Verbeek F.J., De Luca E., Attanasio F., Buccione R., Turco E., et al. (2011) p140Cap suppresses the invasive properties of highly metastatic MTLn3-EGFR cells via impaired cortactin phosphorylation Oncogene.
Fredriksson, L., Herpers B., Benedetti G., Matadin Q., Puigvert J.C., de Bont H., Dragovic S., Vermeulen N.P.E., Commandeur J.N.M., Danen E.H.J., de Graauw M., van de Water B. (2011) Diclofenac inhibits tumor necrosis factor-α-induced nuclear factor-κB activation causing synergistic hepatocyte apoptosis Hepatology 53 (6) p. 2027 - 2041.
Bendall, S.C., Simonds E.F., Qiu P., Amir E.-a D., Krutzik P.O., Finck R., Bruggner R.V., Melamed R., Trejo A., Ornatsky O.I., Balderas R.S., Plevritis S.K., Sachs K., Pe'er D., et al. (2011) Single-Cell Mass Cytometry of Differential Immune and Drug Responses Across a Human Hematopoietic Continuum Science 332 (6030) p. 687 - 696.
Murshudov, G.N., Skubák P., Lebedev A.A., Pannu N.S., Steiner R.A., Nicholls R.A., Winn M.D., Long F., Vagin A.A. (2011) REFMAC 5 for the refinement of macromolecular crystal structures Acta Crystallographica Section D Biological Crystallography 67 (4) p. 355 - 367.
Winn, M.D., Ballard C.C., Cowtan K.D., Dodson E.J., Emsley P., Evans P.R., Keegan R.M., Krissinel E.B., Leslie A.G.W., McCoy A., McNicholas S.J., Murshudov G.N., Pannu N.S., Potterton E.A., et al. (2011) Overview of the CCP 4 suite and current developments Acta Crystallographica Section D Biological Crystallography 67 (4) p. 235 - 242.
Pannu, N.S., Waterreus W.-J., Skubák P., Sikharulidze I., Abrahams J.P., de Graaff R.A.G. (2011) Recent advances in the CRANK software suite for experimental phasing Acta Crystallographica Section D Biological Crystallography 67 (4) p. 331 - 337.
Skubák, P., Pannu N.S. (2011) Reduction of density-modification bias by β correction Acta Crystallographica Section D Biological Crystallography 67 (4) p. 345 - 354.
Georgieva, D., Jansen J., Sikharulidze I., Jiang L., Zandbergen H.W., Abrahams J.P. (2011) Evaluation of Medipix2 detector for recording electron diffraction data in low dose conditions Journal of Instrumentation 6 (01) p. C01033 - C01033.
Roosmalen, W., Le Dévédec S.E., Zovko S. (2011) Cell MigrationFunctional Screening with a Live Cell Imaging-Based Random Cell Migration Assay Methods in Molecular Biology 769, Totowa, NJ, Humana Press p. 435 - 448.
Le Dévédec, S.E., Roosmalen W., Pont C., Lalai R. (2011) Cell MigrationTwo-Photon Intravital Multicolour Imaging to Study Metastatic Behaviour of Cancer Cells In Vivo Methods in Molecular Biology 769, Totowa, NJ, Humana Press p. 331 - 349.
Bertens, L.M., Slob J., Verbeek F.J. (2011) A generic organ based ontology system, applied to vertebrate heart anatomy, development and physiology Journal of Integrative Bioinformatics 8.
2010
Jiang, L., Liu Z., Georgieva D., Kuil M.E., Abrahams J.P. (2010) A novel approximation method of CTF amplitude correction for 3D single particle reconstruction Ultramicroscopy 110 (4) p. 350 - 358.
Carvalho, R., de Sonneville J., Stockhammer O.W., Savage N.D.L., Veneman W.J., Ottenhoff T.H.M., Dirks R.P., Meijer A.H., Spaink H.P. (2010) A High-Throughput Screen for Tuberculosis Progression PLoS ONE 6 (2) p. e16779.
Willems, S.M., van Remoortere A., van Zeijl R.J.M., Deelder A.M., McDonnell L.A., Hogendoorn P.C.W. (2010) Imaging mass spectrometry of myxoid sarcomas identifies proteins and lipids specific to tumour type and grade, and reveals biochemical intratumour heterogeneity Journal of Pathology 222 (4) p. 400 - 409.
Hayles, M.F., Matthijs de Winter D.A., Schneijdenberg C.T.W.M., Meeldijk J.D., Luecken U., Persoon H., de Water J., de Jong F., Humbel B.M., Verkleij A.J. (2010) The making of frozen-hydrated, vitreous lamellas from cells for cryo-electron microscopy Journal of Structural Biology 172 (2) p. 180 - 190.
Le Dévédec, S.E., Yan K.K., de Bont H., Ghotra V.P.S., Truong H.H., Danen E.H.J., Verbeek F.J., van de Water B. (2010) Systems microscopy approaches to understand cancer cell migration and metastasis Cellular and Molecular Life Sciences 67 (19) p. 3219 - 3240.
Liu, Z., Jiang L., Galli F., Nederlof I., Olsthoorn R.C.L., Lamers G.E.M., Oosterkamp T.H., Abrahams J.P. (2010) A Graphene Oxide˙Streptavidin Complex for Biorecognition - Towards Affinity Purification Advanced Functional Materials 20 (17) p. 2857 - 2865.
McDonnell, L.A., Corthals G.L., Willems S.M., van Remoortere A., van Zeijl R.J.M., Deelder A.M. (2010) Peptide and protein imaging mass spectrometry in cancer research Journal of Proteomics 73 (10) p. 1921 - 1944.
McDonnell, L.A., van Remoortere A., van Zeijl R.J.M., Dalebout H., Bladergroen M.R., Deelder A.M. (2010) Automated imaging MS: Toward high throughput imaging mass spectrometry Journal of Proteomics 73 (6) p. 1279 - 1282.
Liu, Z., Galli F., Janssen K.G.H., Jiang L., van der Linden H.J., de Geus D.C., Voskamp P., Kuil M.E., Olsthoorn R.C.L., Oosterkamp T.H., Hankemeier T., Abrahams J.P. (2010) Stable Single-Walled Carbon Nanotube−Streptavidin Complex for Biorecognition The Journal of Physical Chemistry C 114 (10) p. 4345 - 4352.
Jiménez, N., van Donselaar E.G., de Winter D.A.M., Vocking K., Verkleij A.J., Post J.A. (2010) Gridded Aclar: preparation methods and use for correlative light and electron microscopy of cell monolayers, by TEM and FIB-SEM Journal of Microscopy 237 (2) p. 208 - 220.